STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CCP4SEC7 domain-containing protein. (2301 aa)    
Predicted Functional Partners:
A0A484CUK1
Prohibitin.
    
 
 0.981
A0A484CH82
Uncharacterized protein.
      
 0.769
A0A484C6L1
AAA_16 domain-containing protein.
      
 0.691
A0A484DBL6
Uncharacterized protein.
      
 0.674
A0A484CFV0
OBG-type G domain-containing protein.
      
 0.657
A0A484CMT0
Prohibitin.
    
 
 0.657
A0A484C3J3
Uncharacterized protein.
      
 0.653
A0A484DLT2
PWWP domain-containing protein.
      
 0.623
A0A484C8L9
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
   0.540
A0A484CQ03
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
   0.540
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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