Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CCR9Uncharacterized protein. (158 aa)    
Predicted Functional Partners:
A0A484CGL9
Uncharacterized protein.
      
 0.867
A0A484CP74
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
   0.823
A0A484DJ55
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
   0.823
A0A484D1K4
Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.
   
    0.817
A0A484D8T9
Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.
    
   0.814
A0A484CT91
AP complex subunit beta.
    
   0.813
A0A484DCL1
AP complex subunit beta.
    
   0.813
A0A484CS89
Uncharacterized protein.
    
   0.807
A0A484DJC9
Uncharacterized protein.
   
   0.782
A0A484CAM1
Rap-GAP domain-containing protein.
    
   0.772
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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