Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CCS2Uncharacterized protein. (162 aa)    
Predicted Functional Partners:
A0A484CCQ2
Ubiquitin-like domain-containing protein.
    
  0.632
A0A484D1R8
Ubiquitin-like domain-containing protein.
    
 
 0.575
A0A484CE07
Uncharacterized protein.
    
 
 0.569
A0A484DPD5
Proteasome subunit beta.
    
   0.558
A0A484CCR4
USP domain-containing protein.
 
     0.517
A0A484CME9
Uncharacterized protein.
    
   0.515
A0A484CMI6
Uncharacterized protein.
   
 
 0.480
A0A484CCF3
Uncharacterized protein.
     
  0.457
A0A484D458
Uncharacterized protein.
     
  0.457
A0A484DPY2
Protein kinase domain-containing protein.
    
   0.441
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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