Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CCS7Uncharacterized protein. (442 aa)    
Predicted Functional Partners:
A0A484BYY6
TPT domain-containing protein.
      
 0.655
A0A484DMV4
TPT domain-containing protein.
      
 0.652
A0A484D6W6
TPT domain-containing protein.
      
 0.628
A0A484C3I1
Uncharacterized protein.
      
 0.627
A0A484C0A1
CYTH domain-containing protein.
      
 0.626
A0A484DMF0
Uncharacterized protein.
      
 0.623
A0A484DGA4
Uncharacterized protein.
      
 0.576
A0A484C1H4
Uncharacterized protein; Belongs to the LIMR family.
      
 0.565
A0A484D5D4
Uncharacterized protein; Belongs to the LIMR family.
      
 0.565
A0A484CZN4
Nucleoside diphosphate kinase 7; Belongs to the NDK family.
      
 0.534
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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