STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CCW2Uncharacterized protein. (279 aa)    
Predicted Functional Partners:
A0A484CLA2
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
   
 0.831
A0A484CZY0
Uncharacterized protein.
   
 0.829
A0A484D1M3
RPOLD domain-containing protein.
   
 0.825
A0A484C340
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.804
A0A484DHJ0
Uncharacterized protein.
    
 0.804
A0A484DFD7
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.802
A0A484DDT2
RNA_pol_L_2 domain-containing protein.
   
 0.799
A0A484CKG6
Uncharacterized protein.
    
 0.798
A0A484CMZ8
SGF29 C-terminal domain-containing protein.
   
 0.797
A0A484CS47
YL1_C domain-containing protein.
    
 0.789
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.