A0A484CCY5 protein (Perca flavescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A484CCY5

Uncharacterized protein. (587 aa)

Predicted Functional Partners:

A0A484CEX4

0.847

A0A484CYC1

0.845

A0A484C9Z1

0.843

A0A484DA85

0.707

A0A484DDC4

0.707

A0A484CLA9

0.621

A0A484CVM1

0.550

A0A484C1A6

0.546

A0A484D342

0.546

A0A484D6U2

0.546

Your Current Organism:

Perca flavescens

NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A484C1A6	A0A484CCY5	Extracellular sulfatase.	Uncharacterized protein.	0.546
A0A484C1A6	A0A484CEX4	Extracellular sulfatase.	Uncharacterized protein.	0.546
A0A484C1A6	A0A484CVM1	Extracellular sulfatase.	Sulfatase domain-containing protein.	0.480
A0A484C1A6	A0A484CYC1	Extracellular sulfatase.	Sulfatase domain-containing protein.	0.410
A0A484C1A6	A0A484D342	Extracellular sulfatase.	Sulfatase domain-containing protein.	0.488
A0A484C9Z1	A0A484CCY5	Syndecan domain-containing protein.	Uncharacterized protein.	0.843
A0A484C9Z1	A0A484CEX4	Syndecan domain-containing protein.	Uncharacterized protein.	0.843
A0A484C9Z1	A0A484CLA9	Syndecan domain-containing protein.	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.	0.919
A0A484C9Z1	A0A484DDC4	Syndecan domain-containing protein.	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.	0.885
A0A484CCY5	A0A484C1A6	Uncharacterized protein.	Extracellular sulfatase.	0.546
A0A484CCY5	A0A484C9Z1	Uncharacterized protein.	Syndecan domain-containing protein.	0.843
A0A484CCY5	A0A484CEX4	Uncharacterized protein.	Uncharacterized protein.	0.847
A0A484CCY5	A0A484CLA9	Uncharacterized protein.	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.	0.621
A0A484CCY5	A0A484CVM1	Uncharacterized protein.	Sulfatase domain-containing protein.	0.550
A0A484CCY5	A0A484CYC1	Uncharacterized protein.	Sulfatase domain-containing protein.	0.845
A0A484CCY5	A0A484D342	Uncharacterized protein.	Sulfatase domain-containing protein.	0.546
A0A484CCY5	A0A484D6U2	Uncharacterized protein.	Uncharacterized protein.	0.546
A0A484CCY5	A0A484DA85	Uncharacterized protein.	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.	0.707
A0A484CCY5	A0A484DDC4	Uncharacterized protein.	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.	0.707
A0A484CEX4	A0A484C1A6	Uncharacterized protein.	Extracellular sulfatase.	0.546