Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
A0A484CCZ7Ubiquitin-like domain-containing protein. (79 aa)    
Predicted Functional Partners:
A0A484CKX6
RING-type domain-containing protein.
   
 0.993
A0A484C7D6
Uncharacterized protein.
    
 0.988
A0A484DND1
ULP_PROTEASE domain-containing protein.
    
 0.988
A0A484C159
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.986
A0A484DMX3
CPSF_A domain-containing protein.
    
 0.981
A0A484C1A4
MPN domain-containing protein.
   
 0.980
A0A484CWS2
MPN domain-containing protein.
   
 0.978
A0A484DPK3
NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-NAE1 E1 enzyme. E1 activates NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a NEDD8-UBA3 thioester and free AMP. E1 finally transfers NEDD8 to the catalytic cysteine of UBE2M. Belongs to the ubiquitin-activating E1 family. ULA1 subfamily.
    
 0.976
A0A484C076
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.975
A0A484CTS3
UBX domain-containing protein.
    
 0.971
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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