STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CD04Uncharacterized protein. (695 aa)    
Predicted Functional Partners:
A0A484DFN7
Uncharacterized protein.
    
 
 0.981
A0A484CTY4
Uncharacterized protein.
    
 
 0.959
A0A484CF90
Uncharacterized protein.
   
  
 0.896
A0A484C7U1
PDZ domain-containing protein.
   
 
 0.892
A0A484DNI4
Uncharacterized protein.
   
    0.832
A0A484CP90
WD_REPEATS_REGION domain-containing protein.
   
 
 0.794
A0A484CPN6
WD_REPEATS_REGION domain-containing protein.
   
 
 0.794
A0A484CRP2
WD_REPEATS_REGION domain-containing protein.
   
 
 0.794
A0A484CTJ6
WD_REPEATS_REGION domain-containing protein.
   
 
 0.794
A0A484D124
WD_REPEATS_REGION domain-containing protein.
   
 
 0.794
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.