Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
A0A484CD13Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family. (272 aa)    
Predicted Functional Partners:
A0A484C7V9
Histone H2A; Belongs to the histone H2A family.
   
 
 0.861
A0A484DDF9
Histone H2A; Belongs to the histone H2A family.
   
 
 0.861
A0A484C6J4
LRRcap domain-containing protein.
   
 0.836
A0A484CNJ5
LRRcap domain-containing protein.
   
 0.836
A0A484DMB2
LRRcap domain-containing protein.
   
 0.836
A0A484DQV2
LRRcap domain-containing protein.
   
 0.836
A0A484CUF4
Uncharacterized protein.
   
 
 0.835
A0A484CR65
THAP-type domain-containing protein.
    
 
 0.759
A0A484D037
Uncharacterized protein.
   
  
 0.740
A0A484CIE1
Importin N-terminal domain-containing protein.
   
  0.722
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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