STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CD18IG domain-containing protein. (244 aa)    
Predicted Functional Partners:
A0A484C6F1
ERCC4 domain-containing protein.
    
 0.647
A0A484C5E1
Helicase C-terminal domain-containing protein.
    
 0.636
A0A484CB36
Helicase ATP-binding domain-containing protein.
    
 0.636
A0A484D780
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.632
A0A484DDW9
Uncharacterized protein.
    
 0.629
A0A484CH80
DNA polymerase.
    
 0.607
A0A484DJ17
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.583
A0A484C6F2
Sm domain-containing protein.
    
  0.565
A0A484DK46
Uncharacterized protein.
      
 0.564
A0A484DK79
Small nuclear ribonucleoprotein Sm D2.
    
 0.557
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.