Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CD19Uncharacterized protein. (377 aa)    
Predicted Functional Partners:
A0A484CLY5
Uncharacterized protein; Belongs to the tropomyosin family.
   
 0.948
A0A484CPQ9
Uncharacterized protein; Belongs to the tropomyosin family.
   
 0.948
A0A484CZW5
Uncharacterized protein; Belongs to the tropomyosin family.
   
 0.948
A0A484D3B9
Uncharacterized protein; Belongs to the tropomyosin family.
   
 0.948
A0A484D6Y2
Uncharacterized protein; Belongs to the tropomyosin family.
   
 0.948
A0A484D5B5
Uncharacterized protein.
   
 0.946
A0A484DF18
Uncharacterized protein.
   
 0.946
A0A484BZT0
Uncharacterized protein.
   
 0.945
A0A484D2G3
Uncharacterized protein.
   
 0.945
A0A484CNR0
Uncharacterized protein.
   
 0.941
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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