A0A484CD22 protein (Perca flavescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A484CD22

Uncharacterized protein. (367 aa)

Predicted Functional Partners:

A0A484C0Q1

0.646

A0A484BYD3

0.534

A0A484CCM0

0.527

A0A484C1V2

0.464

A0A484C6E8

0.457

A0A484CX80

0.445

A0A484DME5

0.445

A0A484C4Q1

0.428

A0A484C3P1

0.418

A0A484CF96

0.417

Your Current Organism:

Perca flavescens

NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A484BYD3	A0A484C0Q1	Uncharacterized protein; Belongs to the complex I 75 kDa subunit family.	Uncharacterized protein.	0.499
A0A484BYD3	A0A484C1V2	Uncharacterized protein; Belongs to the complex I 75 kDa subunit family.	Alpha-type protein kinase domain-containing protein.	0.461
A0A484BYD3	A0A484CD22	Uncharacterized protein; Belongs to the complex I 75 kDa subunit family.	Uncharacterized protein.	0.534
A0A484C0Q1	A0A484BYD3	Uncharacterized protein.	Uncharacterized protein; Belongs to the complex I 75 kDa subunit family.	0.499
A0A484C0Q1	A0A484C1V2	Uncharacterized protein.	Alpha-type protein kinase domain-containing protein.	0.462
A0A484C0Q1	A0A484CD22	Uncharacterized protein.	Uncharacterized protein.	0.646
A0A484C1V2	A0A484BYD3	Alpha-type protein kinase domain-containing protein.	Uncharacterized protein; Belongs to the complex I 75 kDa subunit family.	0.461
A0A484C1V2	A0A484C0Q1	Alpha-type protein kinase domain-containing protein.	Uncharacterized protein.	0.462
A0A484C1V2	A0A484CD22	Alpha-type protein kinase domain-containing protein.	Uncharacterized protein.	0.464
A0A484C3P1	A0A484CD22	Uncharacterized protein; Belongs to the TOM1 family.	Uncharacterized protein.	0.418
A0A484C3P1	A0A484CF96	Uncharacterized protein; Belongs to the TOM1 family.	Uncharacterized protein.	0.569
A0A484C4Q1	A0A484CCM0	BHLH domain-containing protein.	Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family.	0.461
A0A484C4Q1	A0A484CD22	BHLH domain-containing protein.	Uncharacterized protein.	0.428
A0A484C6E8	A0A484CD22	Uncharacterized protein.	Uncharacterized protein.	0.457
A0A484CCM0	A0A484C4Q1	Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family.	BHLH domain-containing protein.	0.461
A0A484CCM0	A0A484CD22	Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family.	Uncharacterized protein.	0.527
A0A484CD22	A0A484BYD3	Uncharacterized protein.	Uncharacterized protein; Belongs to the complex I 75 kDa subunit family.	0.534
A0A484CD22	A0A484C0Q1	Uncharacterized protein.	Uncharacterized protein.	0.646
A0A484CD22	A0A484C1V2	Uncharacterized protein.	Alpha-type protein kinase domain-containing protein.	0.464
A0A484CD22	A0A484C3P1	Uncharacterized protein.	Uncharacterized protein; Belongs to the TOM1 family.	0.418