Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CD29HMG box domain-containing protein. (306 aa)    
Predicted Functional Partners:
A0A484DA27
Uncharacterized protein.
    
 0.806
A0A484D4I6
Uncharacterized protein.
   
 0.790
A0A484DHI3
TGF_BETA_2 domain-containing protein.
    
 0.707
A0A484D7P1
CCHC-type domain-containing protein.
    
 0.696
A0A484C0U6
Uncharacterized protein.
    
 0.653
A0A484CUW7
POU domain protein.
   
 0.644
A0A484D1N0
Uncharacterized protein.
    
 0.613
A0A484DBE5
Uncharacterized protein.
    
 0.613
A0A484CVW1
POU domain protein.
   
 0.610
A0A484C2E9
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.606
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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