STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CD40Uncharacterized protein. (916 aa)    
Predicted Functional Partners:
A0A484DCR0
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 0.997
A0A484DJ71
DAO domain-containing protein.
  
 0.990
A0A484CL03
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.986
A0A484CN87
SHMT domain-containing protein.
  
 0.986
A0A484D612
SHMT domain-containing protein.
  
 0.986
A0A484DE42
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.986
A0A484DBC7
Uncharacterized protein.
  
 
 0.984
A0A484DCL0
Uncharacterized protein.
  
 
 0.984
A0A484D6U7
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 
 0.979
A0A484C1V1
Beta_elim_lyase domain-containing protein.
   
 0.976
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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