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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CD45Uncharacterized protein. (569 aa)    
Predicted Functional Partners:
A0A484DI80
Uncharacterized protein.
      
 0.877
A0A484D1Q4
Uncharacterized protein.
      
 0.871
A0A484DEM3
Uncharacterized protein.
      
 0.869
A0A484DFQ7
N2227 domain-containing protein.
      
 0.832
A0A484D9V3
Uncharacterized protein.
      
 0.769
A0A484DBN2
Uncharacterized protein.
      
 0.769
MGME1
Mitochondrial genome maintenance exonuclease 1; Metal-dependent single-stranded DNA (ssDNA) exonuclease involved in mitochondrial genome maintenance. Has preference for 5'-3' exonuclease activity. Necessary for maintenance of proper 7S DNA levels. Probably involved in mitochondrial DNA (mtDNA) repair. Belongs to the MGME1 family.
      
 0.744
A0A484D1N7
Uncharacterized protein.
      
 0.627
A0A484D5C4
Uncharacterized protein.
      
 0.627
A0A484DNV5
Uncharacterized protein.
    
   0.449
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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