STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CD50Phosphodiesterase. (727 aa)    
Predicted Functional Partners:
A0A484DFG8
Uncharacterized protein.
   
 
 0.973
A0A484D5D2
Uncharacterized protein.
   
 
 0.968
A0A484C299
Uncharacterized protein.
   
 0.965
A0A484CWI5
Phosphodiesterase.
  
  
0.956
A0A484CKP1
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
 
 0.954
A0A484DET1
WD_REPEATS_REGION domain-containing protein.
   
 
 0.932
A0A484DII8
Guanylate cyclase.
   
 0.870
A0A484C999
Guanylate cyclase.
    
 0.860
A0A484CFE4
Guanylate cyclase.
    
 0.860
A0A484C6H5
Guanylate cyclase.
   
 0.822
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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