STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CD67Uncharacterized protein. (322 aa)    
Predicted Functional Partners:
A0A484C4Y3
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
    
 0.979
A0A484CYZ3
Peptidase_M48 domain-containing protein.
    
 0.963
A0A484D6W9
Protein-S-isoprenylcysteine O-methyltransferase.
   
 0.941
A0A484CHN8
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
    
 0.938
A0A484CY93
Uncharacterized protein.
     
 0.929
A0A484CAM6
Uncharacterized protein.
    
 0.926
A0A484DCN2
Abhydrolase_3 domain-containing protein.
     
 0.847
A0A484DHL0
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
   0.751
A0A484C3N2
USP domain-containing protein; Belongs to the peptidase C19 family.
     
 0.740
A0A484CHS1
USP domain-containing protein; Belongs to the peptidase C19 family.
     
 0.740
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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