Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CD69Uncharacterized protein. (464 aa)    
Predicted Functional Partners:
A0A484CVC1
Uncharacterized protein.
  
  
 
0.900
A0A484C9B4
Uncharacterized protein.
   
 0.689
A0A484C985
Uncharacterized protein.
   
 0.688
A0A484D6B3
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 0.688
A0A484CQT7
Uncharacterized protein.
   
    0.677
A0A484CDK6
Uncharacterized protein.
   
 0.676
A0A484CFE2
Uncharacterized protein.
   
 0.676
A0A484CM29
Uncharacterized protein.
   
 0.676
A0A484CPY6
Uncharacterized protein.
   
 0.676
A0A484CXC8
Uncharacterized protein.
   
 0.676
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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