Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CD75Uncharacterized protein. (506 aa)    
Predicted Functional Partners:
A0A484C0U2
Uncharacterized protein.
    
0.999
A0A484CCD3
Uncharacterized protein.
    
 0.997
A0A484D172
Uncharacterized protein.
    
 0.996
A0A484D2V9
Dynein light chain roadblock.
    
 0.970
A0A484DDP3
Dynein light chain roadblock.
    
 0.970
A0A484CSE3
Dynein light chain.
    
 0.947
A0A484DC08
Dynein light chain.
    
 0.947
A0A484DJI3
Dynein light chain.
    
 0.947
A0A484C468
Uncharacterized protein.
     
 0.894
A0A484CRK5
Uncharacterized protein.
    
 0.889
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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