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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CD87Uncharacterized protein. (607 aa)    
Predicted Functional Partners:
A0A484DBH4
Uncharacterized protein.
    
  0.845
A0A484CML0
PH domain-containing protein.
    
   0.761
A0A484CA31
Uncharacterized protein.
    
   0.750
A0A484C8X8
Uncharacterized protein.
    
  0.654
A0A484CBG7
Uncharacterized protein.
    
  0.654
A0A484CNW3
Uncharacterized protein.
    
  0.654
A0A484DLX7
Uncharacterized protein.
    
  0.654
A0A484C4X6
Uncharacterized protein.
    
 0.652
A0A484D189
Uncharacterized protein.
    
 0.652
A0A484BZS9
Uncharacterized protein.
    
 0.640
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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