STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CD89Uncharacterized protein. (874 aa)    
Predicted Functional Partners:
A0A484BZF0
Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.
     
 0.689
A0A484C765
Amino_oxidase domain-containing protein.
    
 0.688
PAFAH1B1
Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family.
    
 0.688
A0A484DAD6
Uncharacterized protein.
    
 0.688
A0A484CCJ0
Uncharacterized protein.
 
     0.664
A0A484CHP7
RING-type domain-containing protein.
   
 
 0.604
A0A484C816
Platelet-activating factor acetylhydrolase.
     
 0.565
A0A484CB06
Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.
   
 
  0.543
A0A484CFT5
Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.
   
 
  0.536
A0A484C1W3
RING-type domain-containing protein.
   
 
 0.509
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.