STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CD98Uncharacterized protein. (496 aa)    
Predicted Functional Partners:
A0A484DEW9
Uncharacterized protein.
    
0.988
A0A484DNR2
Uncharacterized protein.
   
 0.960
A0A484D8T7
Uncharacterized protein.
  
  
 
0.920
A0A484D5X1
Uncharacterized protein.
    
 0.894
A0A484C222
Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
 0.887
A0A484D3Q6
Uncharacterized protein.
   
 0.881
A0A484D6I3
Uncharacterized protein.
   
 0.881
A0A484CRV7
Uncharacterized protein.
    
 0.878
A0A484DAK8
Uncharacterized protein.
    
 0.878
A0A484D770
Nucleic_acid_bd domain-containing protein.
    
 0.867
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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