Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CDB2PHD domain-containing protein. (320 aa)    
Predicted Functional Partners:
A0A484DC94
Uncharacterized protein.
    
 
 0.956
A0A484D469
Uncharacterized protein.
    
 0.890
A0A484C0W5
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
    
   0.843
A0A484CIZ3
ARID domain-containing protein.
   
 
 0.833
A0A484CU15
Uncharacterized protein.
    
 
 0.818
A0A484CYI9
Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
   0.812
A0A484CZW6
HDAC_interact domain-containing protein.
    
 
 0.806
A0A484D3C0
HDAC_interact domain-containing protein.
    
 
 0.806
A0A484DPZ9
ZP domain-containing protein.
    
 
 0.806
A0A484DGT2
FHA domain-containing protein.
    
 0.799
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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