Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CDB9PKD domain-containing protein. (1008 aa)    
Predicted Functional Partners:
A0A484DP30
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.676
A0A484D5K9
NGF domain-containing protein; Belongs to the NGF-beta family.
    
 
 0.675
A0A484D5V0
Sortilin.
    
 
 0.662
A0A484DF91
Sortilin.
    
 
 0.662
A0A484D944
A4_EXTRA domain-containing protein.
    
 0.631
A0A484DCP3
Uncharacterized protein.
     
 0.619
A0A484BZC3
Sortilin.
    
 
 0.575
A0A484CHE7
Uncharacterized protein.
    
 
 0.558
A0A484CMB5
Uncharacterized protein.
    
 
 0.522
A0A484DIA7
Uncharacterized protein.
    
 
 0.522
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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