Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CDF6DUF155 domain-containing protein. (422 aa)    
Predicted Functional Partners:
A0A484C2I8
SF4 helicase domain-containing protein.
      
 0.834
A0A484DC04
WD_REPEATS_REGION domain-containing protein.
      
 0.774
A0A484CRL6
Uncharacterized protein.
   
  
 0.731
A0A484C309
Uncharacterized protein.
    
   0.709
A0A484CCL5
Uncharacterized protein.
    
   0.709
A0A484D4N5
OBG-type G domain-containing protein.
   
  
 0.678
A0A484CEI5
SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.
   
  
 0.668
A0A484DCS4
Uncharacterized protein.
   
  
 0.666
A0A484CBX8
RF_PROK_I domain-containing protein.
      
 0.662
A0A484CQK2
ATP-dependent Clp protease proteolytic subunit.
   
  
 0.659
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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