STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CDI2Uncharacterized protein. (127 aa)    
Predicted Functional Partners:
A0A484CIJ1
Uncharacterized protein.
 
     0.907
A0A484CIS1
Protein YIPF.
   
 
 0.774
A0A484C3K7
Protein YIPF.
   
 
 0.718
A0A484CSU2
Protein YIPF.
   
 
 0.718
A0A484C7U8
Golgi apparatus membrane protein TVP23 homolog.
   
 
 0.689
A0A484D1W7
Golgi apparatus membrane protein TVP23 homolog.
   
 
 0.689
A0A484C6X8
Protein YIPF.
   
 
 0.643
A0A484CNB8
Protein YIPF.
   
  
 0.534
A0A484CEX9
GOLD domain-containing protein.
    
 
 0.453
A0A484CTU9
Protein YIPF.
   
  
 0.448
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.