Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
A0A484CDI7IF rod domain-containing protein; Belongs to the intermediate filament family. (468 aa)    
Predicted Functional Partners:
A0A484DJG0
Non-specific serine/threonine protein kinase.
      
 0.488
A0A484CMK0
Uncharacterized protein.
  
     0.463
A0A484CLS9
Uncharacterized protein.
  
     0.451
A0A484DEQ7
IF rod domain-containing protein; Belongs to the intermediate filament family.
      
 0.432
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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