Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
A0A484CDI8Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (493 aa)    
Predicted Functional Partners:
A0A484CX78
Methyltransf_25 domain-containing protein.
   
 0.914
A0A484D2L3
Uncharacterized protein.
    
 0.909
A0A484D304
Uncharacterized protein.
    
 0.909
A0A484CLP3
Uncharacterized protein.
     
 0.907
A0A484DKT0
Uncharacterized protein.
     
 0.907
A0A484C8F1
Uncharacterized protein.
     
 0.904
A0A484CH98
Uncharacterized protein.
     
 0.904
A0A484BZW3
Uncharacterized protein.
    
 0.902
A0A484DG90
Uncharacterized protein.
    
 0.902
A0A484D3W3
Uncharacterized protein.
    
 0.901
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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