STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CDK7Uncharacterized protein. (279 aa)    
Predicted Functional Partners:
A0A484C1N2
Checkpoint protein; Belongs to the HUS1 family.
    
 0.999
A0A484CXW2
Cell cycle checkpoint control protein; Belongs to the rad9 family.
    
 0.999
A0A484CBC0
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.997
A0A484DCM7
Uncharacterized protein.
   
 0.991
A0A484D074
AAA domain-containing protein.
   
 0.989
A0A484DKS1
Non-specific serine/threonine protein kinase.
    
 0.980
FEN1
Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]
   
 0.979
A0A484C1L2
Uncharacterized protein.
    
 0.970
A0A484C916
ERCC4 domain-containing protein.
   
 0.961
A0A484CMV1
AAA domain-containing protein.
   
 0.959
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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