STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CDM2Uncharacterized protein. (303 aa)    
Predicted Functional Partners:
A0A484CVP2
Thioredoxin domain-containing protein; Belongs to the NDK family.
    
   0.738
A0A484CL79
Homeobox domain-containing protein.
    
 
 0.549
A0A484D9G2
Homeobox domain-containing protein.
    
 
 0.549
A0A484DAZ1
BHLH domain-containing protein.
   
 0.514
A0A484CTW8
Uncharacterized protein.
    
 
 0.508
A0A484DPQ4
HMG box domain-containing protein.
    
 0.506
A0A484CH29
LID domain-containing protein.
    
 0.499
A0A484CWN2
LID domain-containing protein.
    
 0.499
A0A484DL06
LID domain-containing protein.
    
 0.499
A0A484CJY3
Uncharacterized protein; Belongs to the beta/gamma-crystallin family.
    
 
 0.498
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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