Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CDM9UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (148 aa)    
Predicted Functional Partners:
A0A484DHQ5
Uncharacterized protein.
   
 0.952
A0A484CCQ2
Ubiquitin-like domain-containing protein.
   
 0.928
A0A484CME9
Uncharacterized protein.
   
 0.919
A0A484D1R8
Ubiquitin-like domain-containing protein.
   
 0.908
A0A484CKX6
RING-type domain-containing protein.
   
 0.887
A0A484C2T0
Uncharacterized protein.
    
 0.862
A0A484C159
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.859
A0A484CI76
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 0.859
A0A484CXS4
Uncharacterized protein.
    
 0.854
A0A484DN91
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.854
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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