Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CDN7Uncharacterized protein. (138 aa)    
Predicted Functional Partners:
A0A484DN52
Uncharacterized protein.
    
   0.888
A0A484CDT3
HTTM domain-containing protein.
      
 0.885
A0A484CF38
BTB domain-containing protein.
      
 0.769
A0A484CLM8
TPT domain-containing protein.
      
 0.769
A0A484DPJ2
CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication.
    
   0.738
A0A484CEL0
PX domain-containing protein.
      
 0.708
A0A484CY13
Uncharacterized protein.
      
 0.707
A0A484CZ47
PIP49_N domain-containing protein.
      
 0.706
A0A484CJ35
Prenylcys_lyase domain-containing protein.
      
 0.677
A0A484CTR1
Prenylcys_lyase domain-containing protein.
      
 0.677
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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