Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CDP9Uncharacterized protein. (1766 aa)    
Predicted Functional Partners:
A0A484C553
Uncharacterized protein.
    
 
 0.995
A0A484D648
Uncharacterized protein.
    
 0.971
A0A484D664
Uncharacterized protein.
    
 0.971
A0A484DJK4
Protein kinase domain-containing protein.
    
 
 0.895
A0A484CSS0
DAO domain-containing protein.
      
 0.876
A0A484D987
Uncharacterized protein.
    
 
 0.847
A0A484D489
CEP209_CC5 domain-containing protein.
    
 
 0.805
A0A484CBG1
Uncharacterized protein.
   
 
 0.792
A0A484CD27
SH3 domain-containing protein.
    
 0.772
A0A484CYX7
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta; Promotes the release of prenylated target proteins from cellular membranes. Modulates the activity of prenylated or palmitoylated Ras family members by regulating their subcellular location. Required for normal ciliary targeting of farnesylated target proteins, such as INPP5E. Modulates the subcellular location of target proteins by acting as a GTP specific dissociation inhibitor (GDI). Increases the affinity of ARL3 for GTP by several orders of magnitude. Stabilizes ARL3-GTP by decreasing the nucleotide [...]
      
 0.769
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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