Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CDS7Uncharacterized protein. (226 aa)    
Predicted Functional Partners:
A0A484DEC8
WD_REPEATS_REGION domain-containing protein.
    
 0.963
A0A484CER4
B30.2/SPRY domain-containing protein.
    
 0.962
A0A484CDA0
RRM domain-containing protein.
 
  
  0.948
A0A484DEJ2
WD_REPEATS_REGION domain-containing protein.
   
 0.934
A0A484DH70
WD_REPEATS_REGION domain-containing protein.
   
 0.934
A0A484D901
Uncharacterized protein.
   
 0.932
A0A484DIS2
Uncharacterized protein.
   
 0.932
A0A484DJC9
Uncharacterized protein.
    
 0.928
A0A484CHG3
RRM domain-containing protein.
 
   
  0.926
A0A484CIR8
WD_REPEATS_REGION domain-containing protein.
   
 0.899
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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