STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CDT5Rab-GAP TBC domain-containing protein. (400 aa)    
Predicted Functional Partners:
A0A484CF24
Rab-GAP TBC domain-containing protein.
      
 0.769
A0A484CF79
Uncharacterized protein.
      
 0.769
A0A484CN26
Uncharacterized protein.
     
 0.762
A0A484DAF0
Uncharacterized protein.
     
 0.762
A0A484DKR9
Uncharacterized protein.
      
 0.690
A0A484CDR1
Uncharacterized protein.
      
 0.633
A0A484C932
TLDc domain-containing protein.
      
 0.629
A0A484CZ73
Rab-GAP TBC domain-containing protein.
      
 0.629
A0A484DKU1
Rab-GAP TBC domain-containing protein.
      
 0.629
A0A484CKE5
Rab-GAP TBC domain-containing protein.
      
 0.626
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.