STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CDT6Ubiquitin carboxyl-terminal hydrolase. (948 aa)    
Predicted Functional Partners:
A0A484CA99
G_PROTEIN_RECEP_F1_2 domain-containing protein.
    
 0.764
A0A484CYD6
G_PROTEIN_RECEP_F1_2 domain-containing protein.
    
 0.764
A0A484CME9
Uncharacterized protein.
    
 0.756
A0A484DN91
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.752
A0A484CHL1
Uncharacterized protein.
    
 0.734
A0A484DK32
Uncharacterized protein.
    
 0.734
A0A484DET2
AAA domain-containing protein.
    
 0.716
A0A484DNL0
CYTOSOL_AP domain-containing protein.
    
 0.714
A0A484CQL8
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.694
A0A484CX30
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.694
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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