A0A484CDV6 protein (Perca flavescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A484CDV6

Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. (403 aa)

Predicted Functional Partners:

A0A484D9T9

0.999

A0A484DAU2

0.996

A0A484CXQ9

0.981

A0A484CQQ3

0.972

A0A484C1S5

0.960

A0A484CLQ4

0.952

A0A484D0P7

0.952

A0A484CGL6

0.944

A0A484CHA2

0.944

A0A484DNR8

0.944

Your Current Organism:

Perca flavescens

NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A484C1S5	A0A484CDV6	Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	0.960
A0A484C1S5	A0A484CGL6	Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.	Heme oxygenase; Heme oxygenase cleaves the heme ring at the alpha methene bridge to form biliverdin. Biliverdin is subsequently converted to bilirubin by biliverdin reductase.	0.904
A0A484C1S5	A0A484CHA2	Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.	Uncharacterized protein.	0.904
A0A484C1S5	A0A484CXQ9	Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.	Uncharacterized protein.	0.538
A0A484C1S5	A0A484DAU2	Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.	Uncharacterized protein.	0.455
A0A484C1S5	A0A484DNR8	Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.	Heme oxygenase; Heme oxygenase cleaves the heme ring at the alpha methene bridge to form biliverdin. Biliverdin is subsequently converted to bilirubin by biliverdin reductase.	0.904
A0A484CDV6	A0A484C1S5	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.	0.960
A0A484CDV6	A0A484CGL6	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	Heme oxygenase; Heme oxygenase cleaves the heme ring at the alpha methene bridge to form biliverdin. Biliverdin is subsequently converted to bilirubin by biliverdin reductase.	0.944
A0A484CDV6	A0A484CHA2	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	Uncharacterized protein.	0.944
A0A484CDV6	A0A484CLQ4	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	Uncharacterized protein; Belongs to the multicopper oxidase family.	0.952
A0A484CDV6	A0A484CQQ3	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.	0.972
A0A484CDV6	A0A484CXQ9	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	Uncharacterized protein.	0.981
A0A484CDV6	A0A484D0P7	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	Uncharacterized protein; Belongs to the multicopper oxidase family.	0.952
A0A484CDV6	A0A484D9T9	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.	0.999
A0A484CDV6	A0A484DAU2	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	Uncharacterized protein.	0.996
A0A484CDV6	A0A484DNR8	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	Heme oxygenase; Heme oxygenase cleaves the heme ring at the alpha methene bridge to form biliverdin. Biliverdin is subsequently converted to bilirubin by biliverdin reductase.	0.944
A0A484CGL6	A0A484C1S5	Heme oxygenase; Heme oxygenase cleaves the heme ring at the alpha methene bridge to form biliverdin. Biliverdin is subsequently converted to bilirubin by biliverdin reductase.	Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.	0.904
A0A484CGL6	A0A484CDV6	Heme oxygenase; Heme oxygenase cleaves the heme ring at the alpha methene bridge to form biliverdin. Biliverdin is subsequently converted to bilirubin by biliverdin reductase.	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	0.944
A0A484CGL6	A0A484CHA2	Heme oxygenase; Heme oxygenase cleaves the heme ring at the alpha methene bridge to form biliverdin. Biliverdin is subsequently converted to bilirubin by biliverdin reductase.	Uncharacterized protein.	0.949
A0A484CGL6	A0A484CLQ4	Heme oxygenase; Heme oxygenase cleaves the heme ring at the alpha methene bridge to form biliverdin. Biliverdin is subsequently converted to bilirubin by biliverdin reductase.	Uncharacterized protein; Belongs to the multicopper oxidase family.	0.679