Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CDW1Uncharacterized protein. (406 aa)    
Predicted Functional Partners:
A0A484DG38
V-SNARE coiled-coil homology domain-containing protein.
     
 0.971
A0A484C470
TPR_REGION domain-containing protein.
      
 0.769
A0A484DIG2
Uncharacterized protein.
   
 
 0.758
A0A484C6A2
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
   
  0.748
A0A484CAJ6
PUM-HD domain-containing protein.
   
   0.715
A0A484CQ25
PUM-HD domain-containing protein.
   
   0.715
A0A484CM59
Uncharacterized protein.
      
 0.707
A0A484DLF7
Uncharacterized protein.
      
 0.707
A0A484CZ76
Pannexin_like domain-containing protein.
      
 0.705
A0A484C076
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.697
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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