STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CDX1C3H1-type domain-containing protein. (175 aa)    
Predicted Functional Partners:
A0A484DK79
Small nuclear ribonucleoprotein Sm D2.
   
 0.986
A0A484DJ17
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.985
A0A484C6F2
Sm domain-containing protein.
   
 0.984
A0A484CDG0
Small nuclear ribonucleoprotein Sm D3.
   
 0.983
A0A484D6Z4
Small nuclear ribonucleoprotein G.
   
 0.981
A0A484C102
Uncharacterized protein.
   
 0.979
A0A484CKW2
Uncharacterized protein.
   
 0.972
A0A484CPT2
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
 0.968
A0A484CD03
SAP domain-containing protein.
   
 0.967
A0A484CDF7
Uncharacterized protein.
   
 0.965
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.