Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CDY8Uncharacterized protein. (723 aa)    
Predicted Functional Partners:
A0A484CBP4
Uncharacterized protein.
    
   0.851
A0A484CK83
Uncharacterized protein.
    
   0.829
A0A484C7Q9
Uncharacterized protein.
      
 0.770
A0A484CFF1
Aldolase_II domain-containing protein.
   
 0.680
A0A484CJW1
Aldolase_II domain-containing protein.
   
 0.680
A0A484DB95
Aldolase_II domain-containing protein.
   
 0.680
A0A484DLA9
Aldolase_II domain-containing protein.
   
 0.680
A0A484CSS8
Calponin-homology (CH) domain-containing protein.
      
 0.651
A0A484DIL0
Calponin-homology (CH) domain-containing protein.
      
 0.651
A0A484DNI8
Uncharacterized protein.
      
 0.627
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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