A0A484CDZ9 protein (Perca flavescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A484CDZ9

Hcy-binding domain-containing protein; Involved in the regulation of homocysteine metabolism. (399 aa)

Predicted Functional Partners:

A0A484CDY2

0.983

A0A484D063

0.968

A0A484C403

0.958

A0A484C3V1

0.949

A0A484D2I7

0.949

A0A484CZ51

0.936

A0A484CK16

0.935

A0A484CZX2

0.933

A0A484DG59

0.914

A0A484C6M6

0.904

Your Current Organism:

Perca flavescens

NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A484C3V1	A0A484C403	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.	0.977
A0A484C3V1	A0A484C6M6	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	Amino_oxidase domain-containing protein.	0.904
A0A484C3V1	A0A484CDY2	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	Uncharacterized protein.	0.984
A0A484C3V1	A0A484CDZ9	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	Hcy-binding domain-containing protein; Involved in the regulation of homocysteine metabolism.	0.949
A0A484C3V1	A0A484CK16	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	Aminotran_1_2 domain-containing protein.	0.935
A0A484C3V1	A0A484CZ51	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	Aminotran_1_2 domain-containing protein.	0.935
A0A484C3V1	A0A484CZX2	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.	0.405
A0A484C3V1	A0A484D063	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	Uncharacterized protein.	0.991
A0A484C3V1	A0A484D2I7	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.	0.948
A0A484C3V1	A0A484DG59	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	Adenosylhomocysteinase.	0.985
A0A484C403	A0A484C3V1	Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	0.977
A0A484C403	A0A484CDZ9	Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.	Hcy-binding domain-containing protein; Involved in the regulation of homocysteine metabolism.	0.958
A0A484C403	A0A484CK16	Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.	Aminotran_1_2 domain-containing protein.	0.919
A0A484C403	A0A484CZ51	Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.	Aminotran_1_2 domain-containing protein.	0.919
A0A484C403	A0A484CZX2	Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.	0.570
A0A484C403	A0A484D063	Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.	Uncharacterized protein.	0.999
A0A484C403	A0A484DG59	Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.	Adenosylhomocysteinase.	0.987
A0A484C6M6	A0A484C3V1	Amino_oxidase domain-containing protein.	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	0.904
A0A484C6M6	A0A484CDZ9	Amino_oxidase domain-containing protein.	Hcy-binding domain-containing protein; Involved in the regulation of homocysteine metabolism.	0.904
A0A484C6M6	A0A484D2I7	Amino_oxidase domain-containing protein.	Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.	0.941