STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CGN8Uncharacterized protein. (820 aa)    
Predicted Functional Partners:
A0A484C7T2
NUDE_C domain-containing protein.
    
 
 0.727
A0A484CMN9
NUDE_C domain-containing protein.
    
 
 0.724
A0A484DLX2
NUDE_C domain-containing protein.
    
 
 0.724
A0A484CM03
NUDE_C domain-containing protein.
    
 
 0.703
A0A484CVZ1
Uncharacterized protein.
    
 
 0.689
PAFAH1B1
Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family.
    
 
 0.635
A0A484CPZ8
PACT_coil_coil domain-containing protein.
    
 0.591
A0A484CS31
Uncharacterized protein.
    
 0.591
A0A484DH71
DIX domain-containing protein.
    
 
 0.590
A0A484CC61
Uncharacterized protein.
    
  0.581
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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