STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CP40Ig-like domain-containing protein; Belongs to the MHC class I family. (282 aa)    
Predicted Functional Partners:
A0A484BZZ8
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.
   
 0.763
A0A484CLP9
RPA_C domain-containing protein.
   
 0.763
A0A484D7U8
RPA_C domain-containing protein.
   
 0.763
A0A484D0C6
Uncharacterized protein.
   
 0.739
A0A484DPJ2
CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication.
   
 0.739
A0A484CAT9
Ig-like domain-containing protein.
    
  0.688
A0A484DG79
Ig-like domain-containing protein.
   
 0.670
A0A484CJY8
Ig-like domain-containing protein; Belongs to the MHC class I family.
  
 
0.597
A0A484CPE0
Ig-like domain-containing protein; Belongs to the MHC class I family.
  
 
0.597
A0A484CJN8
Ig-like domain-containing protein; Belongs to the MHC class I family.
  
 
0.596
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.