STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CYJ9RING-type domain-containing protein. (170 aa)    
Predicted Functional Partners:
A0A484CCQ2
Ubiquitin-like domain-containing protein.
    
   0.812
A0A484CIS8
Uncharacterized protein.
    
   0.664
A0A484D1R8
Ubiquitin-like domain-containing protein.
    
   0.664
A0A484D3H3
Uncharacterized protein.
    
   0.664
A0A484CVP2
Thioredoxin domain-containing protein; Belongs to the NDK family.
    
   0.653
A0A484C4V6
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
  0.585
A0A484C8F2
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
  0.585
A0A484DC80
Uncharacterized protein.
   
  0.585
A0A484CEH7
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 
 0.458
A0A484CHW0
Uncharacterized protein.
    
 
 0.455
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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