STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484D3F4CRAL-TRIO domain-containing protein. (307 aa)    
Predicted Functional Partners:
A0A484CLN2
Uncharacterized protein.
    
 0.575
A0A484C0R7
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  0.560
A0A484CPS7
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  0.560
A0A484CTM1
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  0.560
A0A484DE89
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  0.560
A0A484DEN5
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  0.560
A0A484DFQ0
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  0.560
A0A484DEJ9
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.526
A0A484CRI9
Uncharacterized protein.
   
 0.507
A0A484CXR8
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
  0.503
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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