STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484DBY5AA_TRNA_LIGASE_II domain-containing protein. (724 aa)    
Predicted Functional Partners:
A0A484C0Y4
Ribosomal_L18e/L15P domain-containing protein.
   
 
 0.872
A0A484CQL1
Tyrosine--tRNA ligase.
  
 
 0.870
A0A484DKQ0
Tr-type G domain-containing protein.
  
 0.867
A0A484C086
GPI mannosyltransferase 1; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis. Transfers the first alpha-1,4-mannose to GlcN- acyl-PI during GPI precursor assembly.
     
 0.859
A0A484D7U0
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.
  
 
 0.853
A0A484D9N7
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.
    
 0.853
A0A484DMF0
Uncharacterized protein.
  
 
 0.853
A0A484CTV0
Uncharacterized protein.
   
 
 0.844
A0A484DPE2
Mannosyltransferase.
     
 0.839
A0A484CTA7
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.825
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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