STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484DF53Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family. (149 aa)    
Predicted Functional Partners:
A0A484C0Y4
Ribosomal_L18e/L15P domain-containing protein.
  
 
 0.999
A0A484C9A4
Uncharacterized protein.
  
 
 0.999
A0A484CBF8
Uncharacterized protein.
  
 
 0.999
A0A484CCD0
Uncharacterized protein.
  
 
 0.999
A0A484CFI9
Uncharacterized protein.
  
  
 0.999
A0A484CFT1
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 0.999
A0A484CGD2
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
  
 
 0.999
A0A484CGQ9
Uncharacterized protein.
  
 
 0.999
A0A484CHA6
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
  
 
 0.999
A0A484CJR7
RIBOSOMAL_L9 domain-containing protein.
  
 
 0.999
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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