STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484DF7460S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (67 aa)    
Predicted Functional Partners:
A0A484BZI9
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
   
 0.999
A0A484C166
Uncharacterized protein.
   
 0.999
A0A484C661
Ribosomal_S10 domain-containing protein.
   
 
 0.999
A0A484C6Q4
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
 
 0.999
A0A484C8Q9
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.999
A0A484C9X3
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.999
A0A484CBL9
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 
 0.999
A0A484CCP0
Uncharacterized protein.
   
 0.999
A0A484CCQ2
Ubiquitin-like domain-containing protein.
   
 0.999
A0A484CCU4
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
   
 0.999
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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