STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gemin6Gem nuclear organelle associated protein 6. (169 aa)    
Predicted Functional Partners:
gemin7
Gem nuclear organelle associated protein 7.
    
 0.991
gemin8
Gem nuclear organelle associated protein 8.
    
 0.987
ddx20
DEAD-box helicase 20.
    
 0.985
gemin4
Gem nuclear organelle associated protein 4.
    
 0.949
gemin5
Gem nuclear organelle associated protein 5.
    
 0.912
strap
Serine/threonine kinase receptor associated protein.
    
 
 0.897
LOC115582378
Survival motor neuron protein 1-like.
    
 0.892
ENSSAUP00010007549
annotation not available
    
 0.865
ENSSAUP00010043211
Small nuclear ribonucleoprotein polypeptide F.
    
  0.772
snrpe
Small nuclear ribonucleoprotein polypeptide E.
    
 0.766
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.