STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSAUP00010000072annotation not available (658 aa)    
Predicted Functional Partners:
cast
Calpastatin.
   
 0.822
LOC115569860
Calpain small subunit 1-like.
   
0.739
LOC115594096
Calpain small subunit 1-like.
   
0.739
LOC115580231
Talin-2.
    
  0.709
tln2
Talin 2.
    
  0.709
ENSSAUP00010061963
Talin 1.
    
  0.709
ENSSAUP00010000484
Zgc:153993.
   
 
  0.651
ENSSAUP00010068935
Leucine-rich repeats and guanylate kinase domain containing.
    
 
 0.606
ENSSAUP00010007642
penta-EF-hand domain containing 1.
   
 0.591
pdcd6
Programmed cell death 6.
   
 0.591
Your Current Organism:
Sparus aurata
NCBI taxonomy Id: 8175
Other names: Aurata aurata, S. aurata, Sparus auratus, gilthead bream, gilthead seabream, silver seabream
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.